Articles in journals

• John w. O’Malley. "Ignatius, Saint of a Middle Path." America 195.3 (2006): 10-13.

Articles in books

• John W. O’Malley. "An Epilogue." Heresy, Culture, and Religion in Early Modern Italy. Ed. Ronald K. Delph, Michelle M. Fontaine, John Jeffries Martin. Kirksville, MO: Truman State University Press, 2006: 247-51
• John W. O’Malley. "Enthousiasme voor de zending." De Heer van de Vriendschap. Ed. Red Jacques Haers. Antwerp: Averbode, 2006: 221-32
• John W. O’Malley. "Yves Congar as Historian of Ecclesiology." Yves Congar: Historian of the Church. Ed. Gabriel Flynn. Louvain, Belgium: Peeters, 2006: 229-248

Edited books

• John w. O’Malley, Gauvin Alexander Bailey, Steven J. Harris, T. Frank Kennedy, ed. The Jesuits II: Cultures, Sciences, and the Arts, 1540-1773. Toronto, Ontario, Canada: University of Toronto Press, 2006.
• John W. O’Malley, Gauvin Alexander Bailey, ed. The Jesuits and the Arts. Philadelphia, PA: St. Joseph’s University Press, 2005.

Other

• Thirty-six audio-published lectures, The Popes from Peter to Benedict XVI.